We invite you to check out Google Scholar, or Pubmed for a list of publication.
PDFs are available by request
(Last update: 07/2018)
PDFs are available by request
(Last update: 07/2018)
Preprints
(PREPRINT) A first order phase transition underlies the formation of sub-diffractive protein aggregates in mammalian cells A Narayanan, AB Meriin, MY Sherman, II Cisse
bioRxiv, 148395
Peer Reviewed publications
“Mediator and RNA polymerase II clusters associate in transcription-dependent condensates”
Science (2018, in press)
W-K Cho*, J-H Spille*, M. Hecht, C. Lee, C. Li, V. Grube, I. I. Cissé
*first co-authors
“Coactivator condensation at super-enhancers links phase separation and gene control”
Science (2018, in press)
B.R. Sabari*, A.D.'Agnese*, A. Boija, I. A. Klein, E.L. Coffey, K. Shrinivas, B.J. Abraham, N.M. Hannett, A.V. Zamudio, J.C. Manteiga, C.H. Li1,2, Y.E. Guo, D. S. Day, J. Schuijers, E. Vasile, S. Malik, D. Hnisz, T. I. Lee, I. I. Cissé, R.G. Roeder, P.A. Sharp, A.K. Chakraborty, and R.A. Young
*first co-authors
“Hsp70-Bag3 complex is a hub for proteotoxicity-induced signaling that control protein aggregation”
Proc Natl Acad Sci U S A.(2018, in press)
AB Meriin , A Narayanan , LMeng , I Alexandrov , X Varelas , II Cisse , MY Sherman
qSR: a quantitative super-resolution analysis tool reveals the cell-cycle dependent organization of RNA Polymerase I in live human cells
Scientific Reports 2018 (in press) (see bioRxiv, 133082 and bioRxiv, 146241)
JO Andrews*, W Conway*, W-K Cho, A Narayanan, J-H Spille, N Jayanth, T Inoue, S Mullen, JD Thaler and II Cissé
*first co-authors
Global analysis of double-strand break processing reveals in vivo properties of the helicase-nuclease complex AddAB.
PLoS Genet. 2017 May 10;13(5):e1006783. doi: 10.1371/journal.pgen.1006783. eCollection 2017 May.
Badrinarayanan A, Le TBK, Spille JH, Cisse II, Laub MT.
Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing.
Scientific Reports 2016 Oct 26;6:35949. doi: 10.1038/srep35949.
Cho WK, Jayanth N, Mullen S, Tan TH, Jung YJ, Cissé II.
RNA Polymerase II cluster dynamics predict mRNA output in living cells
eLife 2016;10.7554/eLife.13617
Cho W-K, Jayanth N, English BP, Inoue T, Andrews JO, Conway W, Grimm JB, Lavis LD, Lionnet T, Cisse II
Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus.
Elife. 2014 Jun 12:e02230. doi: 10.7554/eLife.02230
Izeddin I, Récamier V, Bosanac L, Cisse II, Boudarene L, Dugast-Darzacq C, Proux F, Bénichou O, Voituriez R, Bensaude O, Dahan M, Darzacq X.
Real-time dynamics of RNA polymerase II clustering in live human cells.
Science. 2013 Aug 9;341(6146):664-7. doi: 10.1126/science.1239053.
Cisse II, Izeddin I, Causse SZ, Boudarene L, Senecal A, Muresan L, Dugast-Darzacq C, Hajj B, Dahan M, Darzacq X.
A rule of seven in Watson-Crick base-pairing of mismatched sequences.
Nat Struct Mol Biol. 2012 May 13;19(6):623-7. doi: 10.1038/nsmb.2294.
Cisse II, Kim H, Ha T.
Fueling protein DNA interactions inside porous nanocontainers.
Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12646-50. Epub 2007 Jun 11.
Cisse I, Okumus B, Joo C, Ha T.
Improving the density of jammed disordered packings using ellipsoids.
Science. 2004 Feb 13;303(5660):990-3.
Donev A, Cisse I, Sachs D, Variano EA, Stillinger FH, Connelly R, Torquato S, Chaikin PM.
(PREPRINT) A first order phase transition underlies the formation of sub-diffractive protein aggregates in mammalian cells A Narayanan, AB Meriin, MY Sherman, II Cisse
bioRxiv, 148395
Peer Reviewed publications
“Mediator and RNA polymerase II clusters associate in transcription-dependent condensates”
Science (2018, in press)
W-K Cho*, J-H Spille*, M. Hecht, C. Lee, C. Li, V. Grube, I. I. Cissé
*first co-authors
“Coactivator condensation at super-enhancers links phase separation and gene control”
Science (2018, in press)
B.R. Sabari*, A.D.'Agnese*, A. Boija, I. A. Klein, E.L. Coffey, K. Shrinivas, B.J. Abraham, N.M. Hannett, A.V. Zamudio, J.C. Manteiga, C.H. Li1,2, Y.E. Guo, D. S. Day, J. Schuijers, E. Vasile, S. Malik, D. Hnisz, T. I. Lee, I. I. Cissé, R.G. Roeder, P.A. Sharp, A.K. Chakraborty, and R.A. Young
*first co-authors
“Hsp70-Bag3 complex is a hub for proteotoxicity-induced signaling that control protein aggregation”
Proc Natl Acad Sci U S A.(2018, in press)
AB Meriin , A Narayanan , LMeng , I Alexandrov , X Varelas , II Cisse , MY Sherman
qSR: a quantitative super-resolution analysis tool reveals the cell-cycle dependent organization of RNA Polymerase I in live human cells
Scientific Reports 2018 (in press) (see bioRxiv, 133082 and bioRxiv, 146241)
JO Andrews*, W Conway*, W-K Cho, A Narayanan, J-H Spille, N Jayanth, T Inoue, S Mullen, JD Thaler and II Cissé
*first co-authors
Global analysis of double-strand break processing reveals in vivo properties of the helicase-nuclease complex AddAB.
PLoS Genet. 2017 May 10;13(5):e1006783. doi: 10.1371/journal.pgen.1006783. eCollection 2017 May.
Badrinarayanan A, Le TBK, Spille JH, Cisse II, Laub MT.
Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing.
Scientific Reports 2016 Oct 26;6:35949. doi: 10.1038/srep35949.
Cho WK, Jayanth N, Mullen S, Tan TH, Jung YJ, Cissé II.
RNA Polymerase II cluster dynamics predict mRNA output in living cells
eLife 2016;10.7554/eLife.13617
Cho W-K, Jayanth N, English BP, Inoue T, Andrews JO, Conway W, Grimm JB, Lavis LD, Lionnet T, Cisse II
Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus.
Elife. 2014 Jun 12:e02230. doi: 10.7554/eLife.02230
Izeddin I, Récamier V, Bosanac L, Cisse II, Boudarene L, Dugast-Darzacq C, Proux F, Bénichou O, Voituriez R, Bensaude O, Dahan M, Darzacq X.
Real-time dynamics of RNA polymerase II clustering in live human cells.
Science. 2013 Aug 9;341(6146):664-7. doi: 10.1126/science.1239053.
Cisse II, Izeddin I, Causse SZ, Boudarene L, Senecal A, Muresan L, Dugast-Darzacq C, Hajj B, Dahan M, Darzacq X.
A rule of seven in Watson-Crick base-pairing of mismatched sequences.
Nat Struct Mol Biol. 2012 May 13;19(6):623-7. doi: 10.1038/nsmb.2294.
Cisse II, Kim H, Ha T.
Fueling protein DNA interactions inside porous nanocontainers.
Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12646-50. Epub 2007 Jun 11.
Cisse I, Okumus B, Joo C, Ha T.
Improving the density of jammed disordered packings using ellipsoids.
Science. 2004 Feb 13;303(5660):990-3.
Donev A, Cisse I, Sachs D, Variano EA, Stillinger FH, Connelly R, Torquato S, Chaikin PM.
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